1). k-fold cross-validation:
In k-fold cross-validation, the original sample is randomly partitioned into k equal sized sub-samples. Of the k sub-samples:
For example, setting k = 2 results in 2-fold cross-validation. In 2-fold cross-validation, we randomly shuffle the dataset into two sets d0 and d1, so that both sets are equal size (this is usually implemented by shuffling the data array and then splitting it in two). We then train on d0 and test on d1, followed by training on d1 and testing on d0.
When k = n (the number of observations), the k-fold cross-validation is exactly the leave-one-out cross-validation.
In stratified k-fold cross-validation, the folds are selected so that the mean response value is approximately equal in all the folds. In the case of a dichotomous classification, this means that each fold contains roughly the same proportions of the two types of class labels.
Business Problem:
Problem is taken from Classification examples (Part 3 - Kernel SVM), where given a set of male/female with a age and salary, will click on a advertisement or not.
Code: k-Fold Cross Validation
# Importing the libraries
import numpy as np
import matplotlib.pyplot as plt
import pandas as pd
# Importing the dataset
dataset = pd.read_csv('Social_Network_Ads.csv')
X = dataset.iloc[:, [2, 3]].values
y = dataset.iloc[:, 4].values
# Splitting the dataset into the Training set and Test set
from sklearn.model_selection import train_test_split
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size = 0.25, random_state = 0)
# Feature Scaling
from sklearn.preprocessing import StandardScaler
sc = StandardScaler()
X_train = sc.fit_transform(X_train)
X_test = sc.transform(X_test)
# Fitting Kernel SVM to the Training set - (Part 3 - Kernel SVM),
from sklearn.svm import SVC
classifier = SVC(kernel = 'rbf', random_state = 0)
classifier.fit(X_train, y_train)
# Predicting the Test set results
y_pred = classifier.predict(X_test)
# Making the Confusion Matrix
# Used to evauate performance of model to see corret/incorrection predictions made by Logistic regression
from sklearn.metrics import confusion_matrix
cm = confusion_matrix(y_test, y_pred)
# Applying k-Fold Cross Validation
from sklearn.model_selection import cross_val_score
accuracies = cross_val_score(estimator = classifier, X = X_train, y = y_train, cv = 10)
accuracies.mean()
accuracies.std()
# Visualising the Training set results
from matplotlib.colors import ListedColormap
X_set, y_set = X_train, y_train
X1, X2 = np.meshgrid(np.arange(start = X_set[:, 0].min() - 1, stop = X_set[:, 0].max() + 1, step = 0.01),
np.arange(start = X_set[:, 1].min() - 1, stop = X_set[:, 1].max() + 1, step = 0.01))
plt.contourf(X1, X2, classifier.predict(np.array([X1.ravel(), X2.ravel()]).T).reshape(X1.shape),
alpha = 0.75, cmap = ListedColormap(('red', 'green')))
plt.xlim(X1.min(), X1.max())
plt.ylim(X2.min(), X2.max())
for i, j in enumerate(np.unique(y_set)):
plt.scatter(X_set[y_set == j, 0], X_set[y_set == j, 1],
c = ListedColormap(('red', 'green'))(i), label = j)
plt.title('Kernel SVM (Training set)')
plt.xlabel('Age')
plt.ylabel('Estimated Salary')
plt.legend()
plt.show()
# Visualising the Test set results
from matplotlib.colors import ListedColormap
X_set, y_set = X_test, y_test
X1, X2 = np.meshgrid(np.arange(start = X_set[:, 0].min() - 1, stop = X_set[:, 0].max() + 1, step = 0.01),
np.arange(start = X_set[:, 1].min() - 1, stop = X_set[:, 1].max() + 1, step = 0.01))
plt.contourf(X1, X2, classifier.predict(np.array([X1.ravel(), X2.ravel()]).T).reshape(X1.shape),
alpha = 0.75, cmap = ListedColormap(('red', 'green')))
plt.xlim(X1.min(), X1.max())
plt.ylim(X2.min(), X2.max())
for i, j in enumerate(np.unique(y_set)):
plt.scatter(X_set[y_set == j, 0], X_set[y_set == j, 1],
c = ListedColormap(('red', 'green'))(i), label = j)
plt.title('Kernel SVM (Test set)')
plt.xlabel('Age')
plt.ylabel('Estimated Salary')
plt.legend()
plt.show()
2).Grid Search:
This method is used to - Improve model performance by choosing the optimal values for the Hyper-parameters (the parameters that are not learned).
Hyper-parameters are parameters that are not directly learnt within estimators. In scikit-learn they are passed as arguments to the constructor of the estimator classes. Typical examples include C, kernel and gamma for Support Vector Classifier, alpha for Lasso, etc
Any parameter provided when constructing an estimator may be optimized in this manner. Specifically, to find the names and current values for all parameters for a given estimator, use:
estimator.get_params()
A search consists of:
The GridSearchCV instance implements the usual estimator API: when “fitting” it on a dataset all the possible combinations of parameter values are evaluated and the best combination is retained.
Note: A small subset of those parameters can have a large impact on the predictive or computation performance of the model while others can be left to their default value.
The grid search provided by GridSearchCV exhaustively generates candidates from a grid of parameter values specified with the param_grid parameter. For instance, the following param_grid:
param_grid = [
{'C': [1, 10, 100, 1000], 'kernel': ['linear']},
{'C': [1, 10, 100, 1000], 'gamma': [0.001, 0.0001], 'kernel': ['rbf']},
]
specifies that two grids should be explored:
Problem is taken from Classification examples (Part 3 - Kernel SVM), where given a set of male/female with a age and salary, will click on a advertisement or not.
Code: Grid Search
# Importing the libraries
import numpy as np
import matplotlib.pyplot as plt
import pandas as pd
# Importing the dataset
dataset = pd.read_csv('Social_Network_Ads.csv')
X = dataset.iloc[:, [2, 3]].values
y = dataset.iloc[:, 4].values
# Splitting the dataset into the Training set and Test set
from sklearn.model_selection import train_test_split
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size = 0.25, random_state = 0)
# Feature Scaling
from sklearn.preprocessing import StandardScaler
sc = StandardScaler()
X_train = sc.fit_transform(X_train)
X_test = sc.transform(X_test)
# Fitting Kernel SVM to the Training set
from sklearn.svm import SVC
classifier = SVC(kernel = 'rbf', random_state = 0)
classifier.fit(X_train, y_train)
# Predicting the Test set results
y_pred = classifier.predict(X_test)
# Making the Confusion Matrix
from sklearn.metrics import confusion_matrix
cm = confusion_matrix(y_test, y_pred)
# Applying k-Fold Cross Validation
from sklearn.model_selection import cross_val_score
accuracies = cross_val_score(estimator = classifier, X = X_train, y = y_train, cv = 10)
accuracies.mean()
accuracies.std()
# Applying Grid Search to find the best model and the best parameters
# Applying Grid Search to find the best model (Linear/Non-Linear (rbf)) and the best parameters
# C - Penalty Parameter
# kernel - Kernel Type (Linear, poly, rbf, sigmoid, precomputed, callable)
from sklearn.model_selection import GridSearchCV
parameters = [
{'C': [1, 10, 100, 1000], 'kernel': ['linear']},
{'C': [1, 10, 100, 1000], 'kernel': ['rbf'], 'gamma': [0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9]}
]
grid_search = GridSearchCV(estimator = classifier,
param_grid = parameters,
scoring = 'accuracy',
cv = 10,
n_jobs = -1)
grid_search = grid_search.fit(X_train, y_train)
best_accuracy = grid_search.best_score_
best_parameters = grid_search.best_params_ # Here output says 'Non-Linear' model will be the best suitable for the given problem.
# Visualising the Training set results (Optional Here)
from matplotlib.colors import ListedColormap
X_set, y_set = X_train, y_train
X1, X2 = np.meshgrid(np.arange(start = X_set[:, 0].min() - 1, stop = X_set[:, 0].max() + 1, step = 0.01),
np.arange(start = X_set[:, 1].min() - 1, stop = X_set[:, 1].max() + 1, step = 0.01))
plt.contourf(X1, X2, classifier.predict(np.array([X1.ravel(), X2.ravel()]).T).reshape(X1.shape),
alpha = 0.75, cmap = ListedColormap(('red', 'green')))
plt.xlim(X1.min(), X1.max())
plt.ylim(X2.min(), X2.max())
for i, j in enumerate(np.unique(y_set)):
plt.scatter(X_set[y_set == j, 0], X_set[y_set == j, 1],
c = ListedColormap(('red', 'green'))(i), label = j)
plt.title('Kernel SVM (Training set)')
plt.xlabel('Age')
plt.ylabel('Estimated Salary')
plt.legend()
plt.show()
# Visualising the Test set results (Optional Here)
from matplotlib.colors import ListedColormap
X_set, y_set = X_test, y_test
X1, X2 = np.meshgrid(np.arange(start = X_set[:, 0].min() - 1, stop = X_set[:, 0].max() + 1, step = 0.01),
np.arange(start = X_set[:, 1].min() - 1, stop = X_set[:, 1].max() + 1, step = 0.01))
plt.contourf(X1, X2, classifier.predict(np.array([X1.ravel(), X2.ravel()]).T).reshape(X1.shape),
alpha = 0.75, cmap = ListedColormap(('red', 'green')))
plt.xlim(X1.min(), X1.max())
plt.ylim(X2.min(), X2.max())
for i, j in enumerate(np.unique(y_set)):
plt.scatter(X_set[y_set == j, 0], X_set[y_set == j, 1],
c = ListedColormap(('red', 'green'))(i), label = j)
plt.title('Kernel SVM (Test set)')
plt.xlabel('Age')
plt.ylabel('Estimated Salary')
plt.legend()
plt.show()
Hope this helps.
Arun Manglick
In k-fold cross-validation, the original sample is randomly partitioned into k equal sized sub-samples. Of the k sub-samples:
- Single sub-sample is retained as the validation data for testing the model, and
- Remaining k − 1 sub-samples are used as training data.
For example, setting k = 2 results in 2-fold cross-validation. In 2-fold cross-validation, we randomly shuffle the dataset into two sets d0 and d1, so that both sets are equal size (this is usually implemented by shuffling the data array and then splitting it in two). We then train on d0 and test on d1, followed by training on d1 and testing on d0.
When k = n (the number of observations), the k-fold cross-validation is exactly the leave-one-out cross-validation.
In stratified k-fold cross-validation, the folds are selected so that the mean response value is approximately equal in all the folds. In the case of a dichotomous classification, this means that each fold contains roughly the same proportions of the two types of class labels.
Business Problem:
Problem is taken from Classification examples (Part 3 - Kernel SVM), where given a set of male/female with a age and salary, will click on a advertisement or not.
Code: k-Fold Cross Validation
# Importing the libraries
import numpy as np
import matplotlib.pyplot as plt
import pandas as pd
# Importing the dataset
dataset = pd.read_csv('Social_Network_Ads.csv')
X = dataset.iloc[:, [2, 3]].values
y = dataset.iloc[:, 4].values
# Splitting the dataset into the Training set and Test set
from sklearn.model_selection import train_test_split
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size = 0.25, random_state = 0)
# Feature Scaling
from sklearn.preprocessing import StandardScaler
sc = StandardScaler()
X_train = sc.fit_transform(X_train)
X_test = sc.transform(X_test)
# Fitting Kernel SVM to the Training set - (Part 3 - Kernel SVM),
from sklearn.svm import SVC
classifier = SVC(kernel = 'rbf', random_state = 0)
classifier.fit(X_train, y_train)
# Predicting the Test set results
y_pred = classifier.predict(X_test)
# Making the Confusion Matrix
# Used to evauate performance of model to see corret/incorrection predictions made by Logistic regression
from sklearn.metrics import confusion_matrix
cm = confusion_matrix(y_test, y_pred)
# Applying k-Fold Cross Validation
from sklearn.model_selection import cross_val_score
accuracies = cross_val_score(estimator = classifier, X = X_train, y = y_train, cv = 10)
accuracies.mean()
accuracies.std()
# Visualising the Training set results
from matplotlib.colors import ListedColormap
X_set, y_set = X_train, y_train
X1, X2 = np.meshgrid(np.arange(start = X_set[:, 0].min() - 1, stop = X_set[:, 0].max() + 1, step = 0.01),
np.arange(start = X_set[:, 1].min() - 1, stop = X_set[:, 1].max() + 1, step = 0.01))
plt.contourf(X1, X2, classifier.predict(np.array([X1.ravel(), X2.ravel()]).T).reshape(X1.shape),
alpha = 0.75, cmap = ListedColormap(('red', 'green')))
plt.xlim(X1.min(), X1.max())
plt.ylim(X2.min(), X2.max())
for i, j in enumerate(np.unique(y_set)):
plt.scatter(X_set[y_set == j, 0], X_set[y_set == j, 1],
c = ListedColormap(('red', 'green'))(i), label = j)
plt.title('Kernel SVM (Training set)')
plt.xlabel('Age')
plt.ylabel('Estimated Salary')
plt.legend()
plt.show()
# Visualising the Test set results
from matplotlib.colors import ListedColormap
X_set, y_set = X_test, y_test
X1, X2 = np.meshgrid(np.arange(start = X_set[:, 0].min() - 1, stop = X_set[:, 0].max() + 1, step = 0.01),
np.arange(start = X_set[:, 1].min() - 1, stop = X_set[:, 1].max() + 1, step = 0.01))
plt.contourf(X1, X2, classifier.predict(np.array([X1.ravel(), X2.ravel()]).T).reshape(X1.shape),
alpha = 0.75, cmap = ListedColormap(('red', 'green')))
plt.xlim(X1.min(), X1.max())
plt.ylim(X2.min(), X2.max())
for i, j in enumerate(np.unique(y_set)):
plt.scatter(X_set[y_set == j, 0], X_set[y_set == j, 1],
c = ListedColormap(('red', 'green'))(i), label = j)
plt.title('Kernel SVM (Test set)')
plt.xlabel('Age')
plt.ylabel('Estimated Salary')
plt.legend()
plt.show()
2).Grid Search:
This method is used to - Improve model performance by choosing the optimal values for the Hyper-parameters (the parameters that are not learned).
Hyper-parameters are parameters that are not directly learnt within estimators. In scikit-learn they are passed as arguments to the constructor of the estimator classes. Typical examples include C, kernel and gamma for Support Vector Classifier, alpha for Lasso, etc
Any parameter provided when constructing an estimator may be optimized in this manner. Specifically, to find the names and current values for all parameters for a given estimator, use:
estimator.get_params()
A search consists of:
- an estimator (regressor or classifier such as sklearn.svm.SVC());
- a parameter space;
- a method for searching or sampling candidates;
- a cross-validation scheme; and
- a score function.
- GridSearchCV exhaustively considers all parameter combinations, while
- RandomizedSearchCV can sample a given number of candidates from a parameter space with a specified distribution.
The GridSearchCV instance implements the usual estimator API: when “fitting” it on a dataset all the possible combinations of parameter values are evaluated and the best combination is retained.
Note: A small subset of those parameters can have a large impact on the predictive or computation performance of the model while others can be left to their default value.
The grid search provided by GridSearchCV exhaustively generates candidates from a grid of parameter values specified with the param_grid parameter. For instance, the following param_grid:
param_grid = [
{'C': [1, 10, 100, 1000], 'kernel': ['linear']},
{'C': [1, 10, 100, 1000], 'gamma': [0.001, 0.0001], 'kernel': ['rbf']},
]
specifies that two grids should be explored:
- one with a Linear kernel and C values in [1, 10, 100, 1000], and
- second one with an RBF kernel, and the cross-product of C values ranging in [1, 10, 100, 1000] and gamma values in [0.001, 0.0001].
Problem is taken from Classification examples (Part 3 - Kernel SVM), where given a set of male/female with a age and salary, will click on a advertisement or not.
Code: Grid Search
# Importing the libraries
import numpy as np
import matplotlib.pyplot as plt
import pandas as pd
# Importing the dataset
dataset = pd.read_csv('Social_Network_Ads.csv')
X = dataset.iloc[:, [2, 3]].values
y = dataset.iloc[:, 4].values
# Splitting the dataset into the Training set and Test set
from sklearn.model_selection import train_test_split
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size = 0.25, random_state = 0)
# Feature Scaling
from sklearn.preprocessing import StandardScaler
sc = StandardScaler()
X_train = sc.fit_transform(X_train)
X_test = sc.transform(X_test)
# Fitting Kernel SVM to the Training set
from sklearn.svm import SVC
classifier = SVC(kernel = 'rbf', random_state = 0)
classifier.fit(X_train, y_train)
# Predicting the Test set results
y_pred = classifier.predict(X_test)
# Making the Confusion Matrix
from sklearn.metrics import confusion_matrix
cm = confusion_matrix(y_test, y_pred)
# Applying k-Fold Cross Validation
from sklearn.model_selection import cross_val_score
accuracies = cross_val_score(estimator = classifier, X = X_train, y = y_train, cv = 10)
accuracies.mean()
accuracies.std()
# Applying Grid Search to find the best model and the best parameters
# Applying Grid Search to find the best model (Linear/Non-Linear (rbf)) and the best parameters
# C - Penalty Parameter
# kernel - Kernel Type (Linear, poly, rbf, sigmoid, precomputed, callable)
from sklearn.model_selection import GridSearchCV
parameters = [
{'C': [1, 10, 100, 1000], 'kernel': ['linear']},
{'C': [1, 10, 100, 1000], 'kernel': ['rbf'], 'gamma': [0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9]}
]
grid_search = GridSearchCV(estimator = classifier,
param_grid = parameters,
scoring = 'accuracy',
cv = 10,
n_jobs = -1)
grid_search = grid_search.fit(X_train, y_train)
best_accuracy = grid_search.best_score_
best_parameters = grid_search.best_params_ # Here output says 'Non-Linear' model will be the best suitable for the given problem.
# Visualising the Training set results (Optional Here)
from matplotlib.colors import ListedColormap
X_set, y_set = X_train, y_train
X1, X2 = np.meshgrid(np.arange(start = X_set[:, 0].min() - 1, stop = X_set[:, 0].max() + 1, step = 0.01),
np.arange(start = X_set[:, 1].min() - 1, stop = X_set[:, 1].max() + 1, step = 0.01))
plt.contourf(X1, X2, classifier.predict(np.array([X1.ravel(), X2.ravel()]).T).reshape(X1.shape),
alpha = 0.75, cmap = ListedColormap(('red', 'green')))
plt.xlim(X1.min(), X1.max())
plt.ylim(X2.min(), X2.max())
for i, j in enumerate(np.unique(y_set)):
plt.scatter(X_set[y_set == j, 0], X_set[y_set == j, 1],
c = ListedColormap(('red', 'green'))(i), label = j)
plt.title('Kernel SVM (Training set)')
plt.xlabel('Age')
plt.ylabel('Estimated Salary')
plt.legend()
plt.show()
# Visualising the Test set results (Optional Here)
from matplotlib.colors import ListedColormap
X_set, y_set = X_test, y_test
X1, X2 = np.meshgrid(np.arange(start = X_set[:, 0].min() - 1, stop = X_set[:, 0].max() + 1, step = 0.01),
np.arange(start = X_set[:, 1].min() - 1, stop = X_set[:, 1].max() + 1, step = 0.01))
plt.contourf(X1, X2, classifier.predict(np.array([X1.ravel(), X2.ravel()]).T).reshape(X1.shape),
alpha = 0.75, cmap = ListedColormap(('red', 'green')))
plt.xlim(X1.min(), X1.max())
plt.ylim(X2.min(), X2.max())
for i, j in enumerate(np.unique(y_set)):
plt.scatter(X_set[y_set == j, 0], X_set[y_set == j, 1],
c = ListedColormap(('red', 'green'))(i), label = j)
plt.title('Kernel SVM (Test set)')
plt.xlabel('Age')
plt.ylabel('Estimated Salary')
plt.legend()
plt.show()
Hope this helps.
Arun Manglick
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